Contact Kinetics in Fractal Macromolecules

Maxim Dolgushev, Thomas Guérin, Alexander Blumen, Olivier Bénichou, and Raphaël Voituriez
Phys. Rev. Lett. 115, 208301 – Published 9 November 2015
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Abstract

We consider the kinetics of first contact between two monomers of the same macromolecule. Relying on a fractal description of the macromolecule, we develop an analytical method to compute the mean first contact time for various molecular sizes. In our theoretical description, the non-Markovian feature of monomer motion, arising from the interactions with the other monomers, is captured by accounting for the nonequilibrium conformations of the macromolecule at the very instant of first contact. This analysis reveals a simple scaling relation for the mean first contact time between two monomers, which involves only their equilibrium distance and the spectral dimension of the macromolecule, independently of its microscopic details. Our theoretical predictions are in excellent agreement with numerical stochastic simulations.

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  • Received 21 May 2015

DOI:https://doi.org/10.1103/PhysRevLett.115.208301

© 2015 American Physical Society

Physics Subject Headings (PhySH)

Polymers & Soft Matter

Authors & Affiliations

Maxim Dolgushev1, Thomas Guérin2, Alexander Blumen1, Olivier Bénichou3, and Raphaël Voituriez3

  • 1Physikalisches Institut, Universität Freiburg, Hermann-Herder-Strasse 3, 79104 Freiburg, Germany
  • 2Université de Bordeaux and CNRS, Laboratoire Ondes et Matière d’Aquitaine (LOMA), UMR 5798, 33400 Talence, France
  • 3Laboratoire de Physique Théorique de la Matière Condensée, CNRS/UPMC, 4 Place Jussieu, 75005 Paris, France

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Issue

Vol. 115, Iss. 20 — 13 November 2015

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